{"id":609,"date":"2021-08-23T08:58:03","date_gmt":"2021-08-23T08:58:03","guid":{"rendered":"http:\/\/susphire.info\/susphireproject\/?page_id=609"},"modified":"2023-06-16T14:50:34","modified_gmt":"2023-06-16T14:50:34","slug":"publications","status":"publish","type":"page","link":"http:\/\/susphire.info\/susphireproject\/publications\/","title":{"rendered":"PUBLICATIONS"},"content":{"rendered":"<div id=\"pl-gb609-6a225aa435070\"  class=\"panel-layout\" ><div id=\"pg-gb609-6a225aa435070-0\"  class=\"panel-grid panel-no-style\" ><div id=\"pgc-gb609-6a225aa435070-0-0\"  class=\"panel-grid-cell\" ><div id=\"panel-gb609-6a225aa435070-0-0-0\" class=\"so-panel widget widget_text panel-first-child panel-last-child\" data-index=\"0\" >\t\t\t<div class=\"textwidget\"><p><span class=\"highwire-citation-author first hw-author-orcid-logo-wrapper has-tooltip hasTooltip\" data-delta=\"0\" data-hasqtip=\"6\" aria-describedby=\"qtip-6\"><span class=\"nlm-surname\">Juter\u0161ek M<\/span><\/span>, <span class=\"highwire-citation-author hw-author-orcid-logo-wrapper has-tooltip hasTooltip\" data-delta=\"1\" data-hasqtip=\"4\"><span class=\"nlm-surname\">Gerasymenko IM<\/span><\/span>,<span class=\"highwire-citation-author hw-author-orcid-logo-wrapper has-tooltip hasTooltip\" data-delta=\"2\" data-hasqtip=\"0\"> <span class=\"nlm-surname\">Petek M<\/span><\/span>, <span class=\"highwire-citation-author\" data-delta=\"3\"><span class=\"nlm-surname\">Haumann E<\/span><\/span>, <span class=\"highwire-citation-author hw-author-orcid-logo-wrapper has-tooltip hasTooltip\" data-delta=\"4\" data-hasqtip=\"7\" aria-describedby=\"qtip-7\"><span class=\"nlm-surname\">Vacas S<\/span><\/span>, <span class=\"highwire-citation-author hw-author-orcid-logo-wrapper\" data-delta=\"5\"><span class=\"nlm-surname\">Kallam K<\/span><\/span>, <span class=\"highwire-citation-author hw-author-orcid-logo-wrapper has-tooltip hasTooltip\" data-delta=\"6\" data-hasqtip=\"1\"><span class=\"nlm-surname\">Gianoglio S<\/span><\/span>, <span class=\"highwire-citation-author hw-author-orcid-logo-wrapper has-tooltip hasTooltip\" data-delta=\"7\" data-hasqtip=\"9\">\u00a0<span class=\"nlm-surname\">Navarro-Llopis V<\/span><\/span>, <span class=\"highwire-citation-author hw-author-orcid-logo-wrapper has-tooltip hasTooltip\" data-delta=\"8\" data-hasqtip=\"8\" aria-describedby=\"qtip-8\"><span class=\"nlm-given-names\">Navarro<\/span> <span class=\"nlm-surname\">Fuertes I<\/span><\/span>, <span class=\"highwire-citation-author hw-author-orcid-logo-wrapper has-tooltip hasTooltip\" data-delta=\"9\" data-hasqtip=\"3\" aria-describedby=\"qtip-3\"><span class=\"nlm-surname\">Patron N, <\/span><\/span><span class=\"highwire-citation-author hw-author-orcid-logo-wrapper has-tooltip hasTooltip author-popup-hover\" data-delta=\"10\" data-hasqtip=\"2\" aria-describedby=\"qtip-2\"><span class=\"nlm-surname\">Orz\u00e1ez D<\/span><\/span>,<span class=\"highwire-citation-author hw-author-orcid-logo-wrapper\" data-delta=\"11\"> <span class=\"nlm-surname\">Gruden K<\/span><\/span>, <span class=\"highwire-citation-author hw-author-orcid-logo-wrapper\" data-delta=\"12\"><span class=\"nlm-surname\">Warzecha H<\/span><\/span>, <span class=\"highwire-citation-author hw-author-orcid-logo-wrapper has-tooltip hasTooltip\" data-delta=\"13\" data-hasqtip=\"5\" aria-describedby=\"qtip-5\">\u00a0<span class=\"nlm-surname\">Baebler <span class=\"nlm-given-names\">\u0160 <strong>(2023) <\/strong><\/span><\/span><\/span>Identification and characterisation of <em>Planococcus citri cis<\/em>&#8211; and <em>trans<\/em>-isoprenyl diphosphate synthase genes, supported by short- and long-read transcriptome data [<a href=\"https:\/\/www.biorxiv.org\/content\/10.1101\/2023.06.09.544309v2\">bioRxiv preprint<\/a>]<\/p>\n<p>Kallam K, Moreno-Gim\u00e9nez E, Mateos-Fern\u00e1ndez R, Tansley C, Gianoglio S, Orzaez D, Patron N. <strong>(2023)<\/strong> Tunable control of insect pheromone biosynthesis in Nicotiana benthamiana. <em>Plant Biotechnol J.<\/em> 2023 Apr 9. <a href=\"https:\/\/onlinelibrary.wiley.com\/doi\/10.1111\/pbi.14048\">doi: 10.1111\/pbi.14048<\/a>.<\/p>\n<p>Juter\u0161ek M, Petek M, Ram\u0161ak \u017d, Moreno-Gim\u00e9nez E, Gianoglio S, Mateos-Fern\u00e1ndez R, Orz\u00e1ez D, Gruden K and Baebler \u0160. <strong>(2022)<\/strong> Transcriptional deregulation of stress-growth balance in <em>Nicotiana benthamiana<\/em> biofactories producing insect sex pheromones. <em>Front. Plant Sci<\/em>. 13:941338. <a href=\"https:\/\/www.frontiersin.org\/articles\/10.3389\/fpls.2022.941338\/full?utm_source=S-TWT&amp;utm_medium=SNET&amp;utm_campaign=ECO_FPLS_XXXXXXXX_auto-dlvrit\">doi: 10.3389\/fpls.2022.941338<\/a><\/p>\n<p>Gand\u00eda M, \u00a0Moreno-Gim\u00e9nez E, \u00a0Giner-Llorca M, Garrigues S, \u00a0Ropero-P\u00e9rez C, \u00a0Locascio A, \u00a0Mart\u00ednez-Culebras PV, \u00a0Marcos JF, \u00a0Manzanares P.\u00a0<strong>(2022)<\/strong> Development of a FungalBraid Penicillium expansum-based expression system for the production of antifungal proteins in fungal biofactories.\u00a0<em>Microb Biotechnol.<\/em> 15(2):630-647. <a href=\"https:\/\/sfamjournals.onlinelibrary.wiley.com\/doi\/10.1111\/1751-7915.14006\">doi: 10.1111\/1751-7915.14006<\/a>.<\/p>\n<p><span data-sheets-formula-bar-text-style=\"font-size:15px;color:#000000;font-weight:normal;text-decoration:none;font-family:'docs-Helvetica Neue';font-style:normal;text-decoration-skip-ink:none;\">Garcia-Perez E, Diego-Martin B, Quijano-Rubio A, Moreno-Gim\u00e9nez E, Selma S, Orzaez D, Vazquez-Vilar M. <strong>(2022)<\/strong> A copper switch for inducing CRISPR\/Cas9-based transcriptional activation tightly regulates gene expression in Nicotiana benthamiana. <em>BMC Biotechnol.<\/em> 22(1):12. doi: <a href=\"https:\/\/bmcbiotechnol.biomedcentral.com\/articles\/10.1186\/s12896-022-00741-x\">10.1186\/s12896-022-00741-x<\/a> [<a href=\"https:\/\/doi.org\/10.1101\/2021.09.07.459151\">bioRxiv <\/a><a href=\"https:\/\/doi.org\/10.1101\/2021.09.07.459151\">preprint<\/a>]<\/span><\/p>\n<p>Mateos Fern\u00e1ndez R, Petek M, Gerasymenko I, Juter\u0161ek M, Baebler \u0160, Kallam K, Moreno Gim\u00e9nez E, Gondolf J, Nordmann A, Gruden K, Orzaez D, Patron NJ. <strong>(2022)<\/strong> Insect pest management in the age of synthetic biology. <em>Plant Biotechnol J<\/em>. 20(1):25-36. <a href=\"https:\/\/onlinelibrary.wiley.com\/doi\/10.1111\/pbi.13685\">doi: 10.1111\/pbi.13685<\/a>.<\/p>\n<p>Gerasymenko I, Sheludko YV, Navarro Fuertes I, Schmidts V, Steinel L, Haumann E, Warzecha H. <strong>(2021)<\/strong>\u00a0 Engineering of a Plant Isoprenyl Diphosphate Synthase for Development of Irregular Coupling Activity. <em>Chembiochem.<\/em> Jan 5;23(1):e202100465. <a href=\"https:\/\/doi.org\/10.1002\/cbic.202100465\">doi: 10.1002\/cbic.202100465\u00a0<\/a><\/p>\n<p><span data-sheets-formula-bar-text-style=\"font-size:16px;color:#000000;font-weight:normal;text-decoration:none;font-family:'Arial';font-style:normal;text-decoration-skip-ink:none;\">Nordmann, A. (2021)\u00a0<\/span><span data-sheets-formula-bar-text-style=\"font-size:16px;color:#000000;font-weight:normal;text-decoration:none;font-family:''Arial'';font-style:italic;text-decoration-skip-ink:none;\">BioTechnology as BioParody \u2013 Strategies for Salience.<\/span><span data-sheets-formula-bar-text-style=\"font-size:16px;color:#000000;font-weight:normal;text-decoration:none;font-family:''Arial'';font-style:normal;text-decoration-skip-ink:none;\">\u00a0<a href=\"https:\/\/doi.org\/10.1162\/posc_a_00384\"><em>Perspectives on Science<\/em> 29 (5): 568\u2013582.<\/a><\/span><\/p>\n<p>Mateos Fern\u00e1ndez, R., Moreno-Gim\u00e9nez, E., Gianoglio, S., Quijano-Rubio, A., Gavald\u00e1-Garc\u00eda,\u00a0J., Estell\u00e9s, L., <span class=\"highwire-citation-author has-tooltip hasTooltip\" data-delta=\"6\" data-hasqtip=\"6\" aria-describedby=\"qtip-6\"><span class=\"nlm-surname\">Rubert<\/span><\/span>, A.,\u00a0<span class=\"highwire-citation-author has-tooltip hasTooltip\" data-delta=\"7\" data-hasqtip=\"1\"><span class=\"nlm-given-names\">Luis<\/span> <span class=\"nlm-surname\">Rambla<\/span><\/span>, J., <span class=\"highwire-citation-author hw-author-orcid-logo-wrapper\" data-delta=\"8\"><span class=\"nlm-surname\">Vazquez-Vilar<\/span><\/span>, M.,\u00a0<span class=\"highwire-citation-author\" data-delta=\"9\"><span class=\"nlm-surname\">Huet<\/span><\/span>, E.,\u00a0<span class=\"highwire-citation-author\" data-delta=\"10\"><span class=\"nlm-surname\">Fern\u00e1ndez-del-Carmen<\/span><\/span>, \u00a0A.,\u00a0<span class=\"highwire-citation-author has-tooltip hasTooltip\" data-delta=\"11\" data-hasqtip=\"3\" aria-describedby=\"qtip-3\">\u00a0<span class=\"nlm-surname\">Espinosa-Ruiz<\/span><\/span>, A., \u00a0<span class=\"highwire-citation-author has-tooltip hasTooltip\" data-delta=\"12\" data-hasqtip=\"2\" aria-describedby=\"qtip-2\">\u00a0<span class=\"nlm-surname\">Juter\u0161ek<\/span><\/span>, M.,\u00a0<span class=\"highwire-citation-author has-tooltip hasTooltip\" data-delta=\"13\" data-hasqtip=\"7\"><span class=\"nlm-surname\">Vacas<\/span><\/span>, \u00a0S.,\u00a0<span class=\"highwire-citation-author\" data-delta=\"14\"><span class=\"nlm-surname\">Navarro<\/span><\/span>, I.,\u00a0<span class=\"highwire-citation-author\" data-delta=\"15\">\u00a0<span class=\"nlm-surname\">Navarro-Llopis<\/span><\/span>, V.,\u00a0<span class=\"highwire-citation-author hw-author-orcid-logo-wrapper has-tooltip hasTooltip\" data-delta=\"16\" data-hasqtip=\"5\" aria-describedby=\"qtip-5\">\u00a0<span class=\"nlm-surname\">Primo-Millo<\/span><\/span>, J.,\u00a0<span class=\"highwire-citation-author hw-author-orcid-logo-wrapper has-tooltip hasTooltip\" data-delta=\"17\" data-hasqtip=\"4\" aria-describedby=\"qtip-4\">\u00a0<span class=\"nlm-surname\">Orz\u00e1ez D.\u00a0<\/span><\/span><strong>(2021)<\/strong> Production of Volatile Moth Sex Pheromones in Transgenic Nicotiana benthamiana Plants, <a href=\"https:\/\/spj.sciencemag.org\/journals\/bdr\/2021\/9891082\/\">BioDesign Research, 2021:9891082<\/a> [<a href=\"https:\/\/www.biorxiv.org\/content\/10.1101\/2021.03.31.437903v2\">bioRxiv preprint<\/a>]<\/p>\n<p>Dudley QM, Cai YM, Kallam K, Debreyne H, Carrasco Lopez JA, Patron NJ <strong>(2021)<\/strong>. Biofoundry-assisted expression and characterization of plant proteins. Synth Biol. 2021 Sep 11;6(1):ysab029. doi: 10.1093\/synbio\/ysab029. <a href=\"https:\/\/pubmed.ncbi.nlm.nih.gov\/34693026\/\">PMID: 34693026<\/a>\u00a0 [<a href=\"https:\/\/doi.org\/10.1101\/2021.03.11.434954\">BioRxiv preprint<\/a>]<\/p>\n<p>Cai YM, Kallam K, Tidd H, Gendarini G, Salzman A, Patron NJ <strong>(2020)<\/strong>\u00a0Rational design of minimal synthetic promoters for plants. Nucleic Acids Res. 2020 Dec 2;48(21):11845-11856. doi: 10.1093\/nar\/gkaa682. <a href=\"https:\/\/pubmed.ncbi.nlm.nih.gov\/32856047\/\">PMID:<\/a> <a href=\"https:\/\/pubmed.ncbi.nlm.nih.gov\/32856047\/\">32856047<\/a>.[<a href=\"https:\/\/www.biorxiv.org\/content\/10.1101\/2020.05.14.095406v1\">bioRxiv <\/a><a href=\"https:\/\/www.biorxiv.org\/content\/10.1101\/2020.05.14.095406v1\">preprint<\/a>]<\/p>\n<p>Patron NJ <strong>(2020)<\/strong>. Beyond natural: synthetic expansions of botanical form and function. New Phytol. 2020 Jul;227(2):295-310. doi: 10.1111\/nph.16562. Epub 2020 Apr 23. <a href=\"https:\/\/pubmed.ncbi.nlm.nih.gov\/32239523\/\">PMID: 32239523<\/a><\/p>\n<p><span data-sheets-formula-bar-text-style=\"font-size:16px;color:#000000;font-weight:normal;text-decoration:none;font-family:'Arial';font-style:normal;text-decoration-skip-ink:none;\">Nordmann, A\u00a0<strong>(2019)<\/strong>\u00a0<\/span><span data-sheets-formula-bar-text-style=\"font-size:16px;color:#000000;font-weight:normal;text-decoration:none;font-family:''Arial'';font-style:italic;text-decoration-skip-ink:none;\">The ties that bind \u2013 collective experimentation and participatory design as paradigms for responsible innovation.<\/span><span data-sheets-formula-bar-text-style=\"font-size:16px;color:#000000;font-weight:normal;text-decoration:none;font-family:''Arial'';font-style:normal;text-decoration-skip-ink:none;\"> (included in Ren\u00e9 von Schomberg and Jonathan Hankins (Hg.), <\/span><a href=\"https:\/\/doi.org\/10.4337\/9781784718862\"><span data-sheets-formula-bar-text-style=\"font-size:16px;color:#000000;font-weight:normal;text-decoration:none;font-family:''Arial'';font-style:italic;text-decoration-skip-ink:none;\">Handbook of Responsible Innovation: A Global Resource<\/span><\/a><span data-sheets-formula-bar-text-style=\"font-size:16px;color:#000000;font-weight:normal;text-decoration:none;font-family:''Arial'';font-style:normal;text-decoration-skip-ink:none;\">, Edward Elgar<\/span><\/p>\n<p>Stephenson MJ, Reed J, Patron NJ, Lomonossoff G, Osbourn A\u00a0<strong>(2019)\u00a0<\/strong>Engineering tobacco for plant natural product production.\u00a0<a href=\"https:\/\/doi.org\/10.1016\/B978-0-12-409547-2.14724-9\">Comprehensive Natural Products III (Third Edition) Chemistry and Biology\u00a06:244-262<\/a><\/p>\n<p>Vazquez-Vilar M, Orzaez D, Patron N <strong>(2018)<\/strong>. DNA assembly standards: Setting the low-level programming code for plant biotechnology. Plant Sci. 2018 Aug;273:33-41. doi: 10.1016\/j.plantsci.2018.02.024. Epub 2018 Mar 3.<\/p>\n<\/div>\n\t\t<\/div><\/div><\/div><\/div>\n\n\n<p><\/p>\n\n\n\n<p><\/p>\n\n\n\n<p><\/p>\n\n\n\n<p><\/p>\n","protected":false},"excerpt":{"rendered":"<p>Juter\u0161ek M, Gerasymenko IM, Petek M, Haumann E, Vacas S, Kallam K, Gianoglio S, \u00a0Navarro-Llopis V, Navarro Fuertes I, Patron N, Orz\u00e1ez D, Gruden K, Warzecha H, \u00a0Baebler \u0160 (2023) Identification and characterisation of Planococcus citri cis- and trans-isoprenyl diphosphate synthase genes, supported by short- and long-read transcriptome data [bioRxiv preprint] Kallam K, Moreno-Gim\u00e9nez E, [&hellip;]<\/p>\n","protected":false},"author":1,"featured_media":0,"parent":0,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"","meta":{"footnotes":""},"class_list":["post-609","page","type-page","status-publish","hentry"],"_links":{"self":[{"href":"http:\/\/susphire.info\/susphireproject\/wp-json\/wp\/v2\/pages\/609","targetHints":{"allow":["GET"]}}],"collection":[{"href":"http:\/\/susphire.info\/susphireproject\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"http:\/\/susphire.info\/susphireproject\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"http:\/\/susphire.info\/susphireproject\/wp-json\/wp\/v2\/users\/1"}],"replies":[{"embeddable":true,"href":"http:\/\/susphire.info\/susphireproject\/wp-json\/wp\/v2\/comments?post=609"}],"version-history":[{"count":10,"href":"http:\/\/susphire.info\/susphireproject\/wp-json\/wp\/v2\/pages\/609\/revisions"}],"predecessor-version":[{"id":646,"href":"http:\/\/susphire.info\/susphireproject\/wp-json\/wp\/v2\/pages\/609\/revisions\/646"}],"wp:attachment":[{"href":"http:\/\/susphire.info\/susphireproject\/wp-json\/wp\/v2\/media?parent=609"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}